Monsanto Swine Genome Project
Project Progress Statistics
Project

============ Project Summary Report ============
38784 Reads processed

1427 Failed Reads. Net Number of Reads -> 37357 (96.32 %)

37177 Runs with Restriction Site. 180 Runs without Restriction Site.
Restriction Site Success: 99.52 %

37118 Runs with Cloning Vector. 59 Runs without Cloning Vector.
Cloning Vector Success: 99.84 % of Reads w/Restriction Site

28178 Runs with PolyA Tail. 5471 Runs without PolyA Tail.
3528 Runs with long PolyA Tail that were excluded.
PolyA Tail Success: 75.79 % of Reads w/Restriction Site

17661 Runs with PolyA Signal. 14045 Runs without PolyA Signal.
polyASignal Success: 55.70 % of Reads w/PolyA Tail

29188 Runs with Valid LibTag. 2518 Runs without Valid LibTag.
LibTag Success: 92.06 % of Reads w/PolyA Tail

2611 Poor Quality Runs. Avg Poor Read Length 120.92
Average Vector Length: 18.74 bases
Average PolyA Tail Length: 24.33 bases
Average Trim Locations: Start 97.22 End 458.50
Average Length of Good Sequence: 361.28
Average Quality of Good Sequence: 33.88

====Number of Reads Submitted to Clustering-->> 29542
====Efficiency of Reads Passing "Quality" from all SCFs-->> 76.17 %
====Efficiency of Reads Passing "Quality" from all good SEQs-->> 79.08 %